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Internet Guide
- Life sciences, biology (37/588)
- Physiology and related subjects (1/138)
- Biochemistry (38/380)
- Specific physiological systems in animals, regional histology and physiology in animals (2/53)
- Specific parts of and physiological systems in plants (0/14)
- Genetics and evolution (1/80)
- Ecology (37/217)
- Natural history of organisms and related subjects (12/226)
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Natural history of specific kinds of organisms (0/1872)
- Microorganisms, fungi and algae (25/179)
- Plants (Botany) (54/268)
- Specific topics in natural history of plants (2/325)
- Plants noted for specific vegetative characteristics and flowers (3/53)
- Animals (Zoology) (23/265)
- Specific topics in natural history of animals (2/127)
- Specific taxonomic groups of plants (0/138)
- Specific taxonomic groups of animals (0/871)
- Economics of land and energy (2/325)
- Other subjects (0/398)
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Biochemical genetics in animals
Biochemical genetics in animals
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The goals of the Drosophila Genome Center are to finish the sequence of the euchromatic genome of Drosophila melanogaster to high quality and to generate and maintain biological annotations of this sequence. In addition to genomic sequencing, the BDGP is 1) producing gene disruptions using P element-mediated mutagenesis on a scale unprecedented in metazoans; 2) characterizing the sequence and expression of cDNAs; and 3) developing informatics tools that support the experimental process, identify ... [Information of the supplier]
Discipline based websites
http://www.fruitfly.org/
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Bgee is a database to retrieve and compare gene expression patterns between animal species. Bgee first maps heterogeneous expression data (currently EST, Affymetrix, and in situ hybridization data) on anatomy and development of different species. Then, in order to perform automated cross species comparisons, homology relationships across anatomies, and comparison criteria between developmental stages, are designed.
Data can be retrieved by ontology browsing, textual search, expression search, or ... [Information of the supplier]
Factual databases
http://bgee.unil.ch/bgee/bgee
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Cancer GEnome Mine is a public database for storing clinical information about tumor samples and microarray data, with emphasis on array comparative genomic hybridization (aCGH) and data mining of gene copy number changes. CanGEM supports the MIAME standard and in addition, stores clinical information using standardized controlled vocabularies whenever possible. Microarray probes are re-annotated with their physical coordinates in the human genome and aCGH data is analyzed to yield gene-specific ... [Information of the supplier, modified]
Factual databases
http://www.cangem.org/
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The cyclic AMP response element (CRE)-binding protein (CREB) family of activators (CREB1, CREM, ATF1) functions in diverse physiological processes, including the control of cellular metabolism, growth-factor-dependent cell survival, and developement an plasticity of neurons. A diverse range of signals, including cAMP, calcium, stress and mitogenic stimuli, can activate CREB and promote target gene expression. This database is dedicated to catogerize CREB target genes in a comprehensive and easy-to-search ... [Information of the supplier, modified]
Factual databases
http://natural.salk.edu/CREB/
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The Open Tiger Genome Project is a public service launched by a non-profit foundation Genome Research Foundation (GRF) and TheragenEtex Inc.
It is aming at preserving tiger genome information, the level 1 endangered species designated by the Korean Ministry of Environment. Genome Research Foundation is pursuing to complete the standard reference genome of Amur (Korean or Siberian) tiger by sequencing and analyzing its genome. [Information of the supplier]
Factual databases; Discipline based websites
http://tigergenome.org/
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In animals, RNA binding proteins (RBPs) and microRNAs (miRNAs) post-transcriptionally regulate the expression of virtually all genes by binding to RNA. Recent advances in experimental and computational methods facilitate transcriptome-wide mapping of these interactions. It is thought that the combinatorial action of RBPs and miRNAs on target mRNAs form a post-transcriptional regulatory code. We provide a database that supports the quest for deciphering this regulatory code. Within doRiNA, we are ... [Miscellaneous as indicated]
Factual databases
http://dorina.mdc-berlin.de/rbp_browser/dorina.html
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Dr.VIS collects and locates human disease-related viral integration sites. So far, about 600 sites covering 5 virus organisms and 11 human diseases are available. Integration sites in Dr.VIS are located against chromesome, cytoband, gene and refseq position as specific as possible. Viral-cellular junction sequences are extracted from papers and nucleotide databases, and linked to cooresponding integration sites Graphic views summarizing distribution of viral integration sites are generated according ... [Information of the supplier]
Factual databases
http://bminfor.tongji.edu.cn/drvis/
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Earthworms are essential to the life and health of the planet's soils, and thus to the life and health of terrestrial ecosystems. Charles Darwin and others have shown that earthworms both make soil, and ensure its fertility. Lumbricus rubellus is a common earthworm, found in many temperate ecosystems, used as a model species by researchers investigating the biology and ecology of the soil, and the effects of pollutants and other chemicals on soil organisms. This website is the home of our efforts ... [Information of the supplier]
Research projects; Discipline based websites
http://xyala.cap.ed.ac.uk/Lumbribase/
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Ascertaining when and where genes are expressed is of crucial importance in order to understand the physiological role of a given gene/protein and the interactions between them. In addition, the normal expression patterns can then be compared to those observed in a variety of pathological conditions to identify pathological hallmarks of gene expression. The EURExpress, an integrated project funded by the EU under the VI Framework proposes a transcriptome-wide acquisition of expression patterns chiefly ... [Information of the supplier]
Factual databases; Research projects
http://www.eurexpress.org/ee
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The Fish Barcode of Life effort is creating a valuable public resource in the form of an electronic database containing DNA barcodes, images, and geospatial coordinates of examined specimens. The database contains linkages to voucher specimens, information on species distributions, nomenclature, authoritative taxonomic information, collateral natural history information and literature citations. FISH-BOL thus complements and enhances existing information resources, including FishBase and various ... [Information of the supplier]
Academic societies, professional associations, working groups; Discipline based websites
http://www.fishbol.org/
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