ZFIN serves as the zebrafish model organism database. The long term goals for ZFIN are a) to be the community database resource for the laboratory use of zebrafish, b) to develop and support integrated zebrafish genetic, genomic and developmental information, c) to maintain the definitive reference data sets of zebrafish research information, d) to link this information extensively to corresponding data in other model organism and human databases, e) to facilitate the use of zebrafish as a model for human biology and f) to serve the needs of the research community. ... [Information of the supplier]
The HuGE Literature Finder is one component of the HuGE Navigator, an integrated, searchable knowledge base of genetic associations and related information in human genome epidemiology. In 2001, HuGENet launched the HuGE Published Literature database (HuGE Pub Lit), a continually updated and accessible knowledge base on the World Wide Web that tracks the growing published literature of human genome epidemiologic studies. HuGE Pub Lit offers a starting point for assembling articles for meta-analysis, highlighting research gaps, suggesting applied research questions, and identifying potential collaborators. HuGE Pub Lit contains links to abstracts on PubMed that meet the inclusion and exclusion criteria (see below). HuGENet research staff is responsible for extracting relevant articles from PubMed and entering them into the HuGE Pub Lit database on a weekly basis. Since June 2007, a new automatic HuGE literature screening – GAPscreener was implemented to assist the weekly HuGE literature scanning from PubMed. The sensitivity of HuGE literature screening performance can reach 97.5%. An average of 500 new articles per week is retrieved by GAPscreener. A researcher who is familiar with the eligibility criteria for human genome epidemiology then reviews each title and abstract (or in a few cases, the full text). This researcher decides whether the study will be included in the database and, if it will, assigns indexing for each article. HuGE Literature Finder is a newly-designed HuGE Pub Lit database that utilizes the Unified Medical Language System (UMLS) as an indexing mechanism. ... [Information of the supplier]
The Rat Genome Database RatMap is focused on presenting rat genes, DNA-markers, QTL:s etc that is localized to chromosome. The database is dedicated to rat gene nomenclature and should be consulted for queries in such. RatMap is formally sorting under the (RGNC) and is maintained at the Dept for Cell and Molecular Biology, Göteborg University, Sweden. Within RatMap you can find information on: rat gene nomenclature, chromosomal positions for genes, DNA-markers, QTL:s etc., predicted position for more than 6000 rat genes (see GAPP), gene function, literature references, DNA-sequences with links to DDBJ/EMBL/GenBank, unigene and Locus Link ID:s and links. ... [Information of the supplier]
The Gene Expression Literature Query Form allows you to query for references that include data on endogenous gene expression in the mouse. The Gene Expression Database (GXD) curators create content records that contain information on the genes and ages analyzed and assay types used in each reference; the query form queries these content records. To the best of our knowledge, all publications containing embryonic expression data from 1993 to the present for all pertinent journals, and from 1990 to the present for the major development journals, have content records. However, expression assays using knock-in reporter genes have only been included in the content records since May 2002. Curators add content records to GXD daily. ... [Information of the supplier]