Detailed overview:
MfunGD - MIPS Mouse Functional Genome Database
Title: MfunGD - MIPS Mouse Functional Genome Database
Title abbreviated: MfunGD
Creator: Forschungszentrum für Umwelt und Gesundheit = GSF <Neuherberg> / Munich Information Center for Protein Sequences = MIPS
Abstract: MfunGD provides a resource for annotated mouse proteins and their occurence in protein networks. Protein function annotation is performed using the Functional Catalogue (FunCat) annotation scheme, which is a hierarchically structured classification system (Ruepp et al., NAR, 2004). To provide up-to-date similarity search results and InterPro domain analyses, the protein entries are interconnected with the SIMAP database (Rattei et al., NAR, 2006). The gene models are based on the RefSeq mouse cDNAs (Pruitt et al., NAR, 2007) The work of our group is focussed on the annotation of biological systems. Therefore, results from the Mammalian Protein-Protein Interaction Database ( MPPI, (Pagel et al., Bioinformatics, 2005 )) and the Comprehensive Resource of Mammalian Protein Complexes (CORUM, (Ruepp et al., NAR, 2007)) are linked to the MfunGD dataset. Links to external resources are also provided (e.g. Refseq, Uniprot, UCSC Genome Browser). MfunGD is implemented in GenRE, a J2EE based component oriented multi-tier architecture (Mewes et al., NAR, 2006). [Information of the supplier]
Subject: Proteins (572.6);
General topics in biochemical genetics (572.83)
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Audience: Intermediate; Experts
Language: English
Format: website; database
Resource type: Factual databases
Access: free
Metadata update date: 2015-09-18
Metadata provider: UBFfm
URL of this vifabio-resource:
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