Detailed overview:
The Adaptive Evolution Database (TAED)
Title: The Adaptive Evolution Database (TAED)
Title abbreviated: TAED
Identifier alternative:
Creator: Liberles, D.A.; et al.
Publisher: Norwegian Bioinformatics Platform
Abstract: The Adaptive Evolution Database (TAED) consists of 4,294 higher plant and 15,452 chordate gene families. For each of these families, multiple sequence alignments, phylogenetic trees, ratios of nonsynonymous to synonymous nucleotide substitution rates (Ka/Ks), mappings from gene trees to the NCBI taxonomy (mapped only to the most recent branch possible), and structural links to solved three dimensional protein structures in PDB with Grantham-weighted mutational factors were all calculated. The gene families themselves can be accessed through the links below. A taxonomic link-in is also available to view all families with Ka/Ks > 1 occurring along the same lineage together with a tie to the appropriate gene families. [Information of the supplier]
Subject: Evolution (576.8)
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Audience: Intermediate; Experts
Language: English
Format: website
Resource type: Discipline based websites
Access: free
Metadata update date: 2014-09-29
Metadata provider: UBFfm
URL of this vifabio-resource:
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