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Database Guide
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The Characterized Protein Database, CharProtDB, is designed and being developed as a resource of expertly curated, experimentally characterized proteins described in published literature. For each protein record in CharProtDB, storage of several data types is supported. It includes functional annotation ... [Information of the supplier]
www.jcvi.org/charprotdb/index.cgi/home
No other database than ESTHER holds all alpha/beta hydrolase fold proteins together: Interpro, Prosite, Pfam, have multiple entries for subsets of this structural superfamily. A table Synthese shows the correspondance between these database entries and the subfamilies in ESTHER. The ESTHER Table is now a ... [Information of the supplier]
bioweb.ensam.inra.fr/ESTHER/general?what=index
ENZYME is a repository of information relative to the nomenclature of enzymes. It is primarily based on the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB) and it describes each type of characterized enzyme for which an EC (Enzyme ... [Information of the supplier]
enzyme.expasy.org/
Proteases are a diverse and important group of enzymes representing >2% of the human, chimpanzee, mouse and rat genomes. This group of enzymes is implicated in numerous physiological processes. The importance of proteases is illustrated by the existence of 80 different hereditary diseases due to ... [Information of the supplier]
degradome.uniovi.es/
This internet database integrates information on sequence and structure of cytochrome P450 monooxygenases to facilitate protein engineering. We acknowledge your comments or contribution to this page: please send us information to be included in this database. [Information of the supplier]
https://cyped.biocatnet.de/
FunTree provides a range of data resources to detect the evolution of enzyme function within distant structurally related clusters within domain super families as determined by CATH. To access the resource enter a specific CATH superfamily code or search for a structure / sequence / function (either via ... [Information of the supplier]
www.ebi.ac.uk/thornton-srv/databases/FunTree/
Polbase(R) is an open repository of DNA polymerase information. The goals are: a) Provide a free and open information resource focused on DNA polymerases; b) Extract primary results from published and unpublished sources; c) Present results in context, without editorial bias, verified by authors; d) ... [Information of the supplier]
polbase.neb.com/
The p53 tumor suppressor gene was initially identified as being essential for the DNA damage checkpoint, but it was subsequently found to have a broader function after cellular stress, such as oncogene activation or hypoxia. The p53 protein functions as a tetrameric transcription factor found at very low ... [Information of the supplier, modified]
p53.free.fr/
SWISS-2DPAGE is an annotated two-dimensional polyacrylamide gel electrophoresis (2-D PAGE) and SDS-PAGE database established in 1993 and maintained collaboratively by the Biomedical Proteomics Reasearch Group (BPRG) of the Geneva University and the Proteome Informatics Group of the Swiss Institute of ... [Information of the supplier]
www.expasy.ch/ch2d/ch2d-top.html
AACompIdent is a tool which allows the identification of a protein from its amino acid composition. It searches the Swiss-Prot and / or TrEMBL databases for proteins, whose amino acid compositions are closest to the amino acid composition given. [Information of the supplier]
www.expasy.ch/tools/aacomp/
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